Managing tax overpayments and repayments (2024)

Overpayments and repayments are two of the most common anomalies that could complicate year-end and W-2 processing. Now is a great time to sort out any potential difficulties.

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Managing tax overpayments and repayments (1)What is an overpayment on taxes?
Managing tax overpayments and repayments (2) Overpayments and repayments in the current year
Managing tax overpayments and repayments (3)
Overpayments and repayments in subsequent years
Managing tax overpayments and repayments (4)Preventing tax overpayments

What is an overpayment on taxes?

In simple terms, an overpayment on taxes is paying more than what is owed. Overpayments and repayments may seem complicated, but they generally boil down to one simple rule of thumb: Recover net from overpayments that are repaid in the current year and gross from overpayments that aren’t repaid until a subsequent year.

What are the IRS guidelines on overpayment of wages?

As outlined by the IRS in the Publication 15, (Circular E), Employer’s Tax Guide, if your employee repays you for wages they received in error, do not offset the repayments against current year wages unless the repayments are for amounts received in error in the current year.

To further explain, let’s look at both overpayments and repayments in the current and subsequent years.

Overpayments and repayments in the current year

Overpayments are considered paid when received and must be included in the employee’s income when received. If the employee repays the advance or overpayment during the same year they received it, the employer should exclude the amount from the employee’s income when filing the W-2.

The employee should repay the net amount and the employer will need to submit properly amended federal and state returns. In these cases, it’s also important to watch state and federal unemployment, as they may be overstated. If this happens, amendments may need to be filed for the affected quarters.

Let’s look at an example:

ABC Company hires Mike on May 1, 2022 at a salary of $3,000 per month. Mike receives a sign-on bonus of $1,000 that he must repay if he leaves ABC within one year of hire. Mike resigns on December 2, 2022 and repays the sign-on bonus. Because he repaid the bonus in the same year it was originally paid, he owes only the net amount of $698.50. ABC will issue the net transaction on Mike’s W-2.

Here’s how Mike’s W-2 would appear in this scenario:

Managing tax overpayments and repayments (5)

Reporting repayment of current year wages

According to the IRS, if a company receives repayments for wages paid during a prior quarter in the current year, they must report adjustments on Form 941-X to recover income tax withholding and social security and Medicare taxes for the repaid wages.

Overpayments and repayments in subsequent years

Things get a bit more complicated when an overpayment isn’t repaid until a subsequent year. Again, overpayments are considered paid when received and must be included in the employee’s income when received.

If the employee doesn’t repay the advance or overpayment until a subsequent year, they’ll need to repay the gross amount — the net amount they received plus any federal or state income tax. The employer cannot collect federal or state income tax withheld in a prior year, so no correction can be made for income taxes withheld. The employee can, however, claim a deduction on their personal income tax return for the tax they repaid.

Let’s look at an example:

ABC Company hires Mike on May 8, 2021 at a salary of $3,000 per month. Mike also receives a sign-on bonus of $1,000 that he must repay if he leaves ABC within one year of hire. Mike resigns on January 31, 2022 and repays the sign-on bonus. Because the repayment took place in a different year than the original payment, Mike owes the net amount of $693.50, plus the $250 in federal tax that was withheld and remitted to the IRS. ABC will issue the gross transaction on Mike’s W-2C. Mike will deduct the $250 from his 2022 income tax return.

Managing tax overpayments and repayments (6)

Reporting repayment of prior year wages

As explained by the IRS, if a company receives repayments for wages paid during a prior year it must report an adjustment on Form 941-X or Form 944-X to recover the social security and Medicare taxes. The employer cannot make an adjustment for income tax withholding because the wages were income to the employee for the prior year, the agency noted.

The IRS also states that an employer also cannot make an adjustment for Additional Medicare Tax withholding because the employee determines liability for Additional Medicare Tax on the employee’s income tax return for the prior year. The company must also file Forms W-2c and W-3c with the Social Security Administration (SSA) to correct social security and Medicare wages and taxes. Provide the employee with a copy of Form W-2c.

Preventing tax overpayments

Recover net from current-year repayments and gross from subsequent-year repayments. Remembering this one simple rule can help ease confusion and headaches when tax season rolls around.

However, it is obviously best to prevent tax overpayments and other payroll errors from happening in the first place. This means having the right tools and resources in place such as a full-service payroll software solution.

It is important to keep in mind that tax overpayments, as well as underpayments, can also arise in the indirect tax process. This is especially true when companies take a manual approach to the P2P tax process, which can involve dozens of time-consuming steps that drain resources.

If you’re a payroll professional, watch a demo of Thomson Reuters Accounting CS® Payroll in action. If you work in indirect tax, leverage a global tax determination software to prevent tax overpayments, underpayments, and penalties that can accumulate and weaken your company’s financial strength. Try the software out with a free demo.

Managing tax overpayments and repayments (2024)

FAQs

How to fix tax overpayment? ›

You get an overpayment credit when your tax payments exceed what you owe. You'll automatically receive a refund of the credit. However, you can ask us to apply the credit as an advance payment towards next year's taxes instead of sending it to you as a refund.

How does the IRS handle overpayments? ›

Taxpayers can choose to apply any portion of their overpayment to the following tax year or receive their refund as a check or direct deposit. Direct deposits can be split among as many as three different accounts by using Form 8888.

Is it good to apply for overpayment on taxes? ›

While you're not required to apply your overpayment of taxes to next year, doing so allows you to get a head start on next year's taxes. This may be especially helpful if you're going to have income that's not subject to withholding.

Which two types of payments can be included in an overpayment? ›

A benefit overpayment is when you collect unemployment, disability, or Paid Family Leave (PFL) benefits you are not eligible to receive.

What is a tax overpayment? ›

In simple terms, an overpayment on taxes is paying more than what is owed.

How to correct payroll errors? ›

The first step is to correct the deduction error in the payroll system. Next, you should adjust the following paychecks to reimburse the over-deducted amount. You should notify all affected employees of the error, and clarify when they'll see the corrections reflected in their pay.

Does the IRS penalize you for overpaying taxes? ›

We'll refund any tax you overpaid if you owe no other tax or have no other debts the law requires us to collect.

Does the IRS pay interest on tax overpayments? ›

In accordance with IRC 6611(a), interest is allowed and paid on any overpayment of tax at the overpayment rate established under IRC 6621. IRC 6621 provides the interest rates on overpayments and underpayments of tax, which are tied to the Federal short-term interest rate.

What happens if you pay too little in taxes? ›

Underpayment penalties are typically 5% of the underpaid amount and they're capped at 25%. Underpaid taxes also accrue interest at a rate that the IRS sets quarterly.

Should you pay back overpayment? ›

If you do not pay back an overpayment or monetary penalty, the Department of Labor may take legal action to file a judgment against you.

What happens if you don't return overpayment? ›

If you do not repay your overpayment on time, the money can be deducted from future unemployment, disability, or Paid Family Leave benefits. We can also: Withhold your federal and state income tax refunds. Withhold your state lottery winnings.

Why do some people owe money on taxes? ›

At a glance: Common reasons for owing taxes include insufficient withholding, extra income, self-employment tax, life changes, and tax code changes.

How do I contact the IRS about an overpayment? ›

You may call us toll-free at 800-829-1040, M - F, 7 a.m. - 7 p.m. Generally, if the financial institution recovers the funds and returns them to the IRS, the IRS will send a paper refund check to your last known address on file with the IRS.

Can you change an overpayment applied to a refund? ›

If the IRS erroneously applies an overpayment that the taxpayer requested to be refunded, the taxpayer or the taxpayer's representative can call the IRS and request the overpayment be reversed back to the prior year and a refund issued.

Can you write off overpayments? ›

If a customer has overpaid you, the overpayment would usually be allocated to the customer's next invoice. It is, therefore, an exceptionally rare practice to write off an overpayment.

How do I reverse a tax offset? ›

You generally cannot stop a tax refund offset. The IRS service center processing the return will likely not honor the request. However, the documentation submitted with the tax return can help with other interactions with the IRS. This first option presupposes that the taxpayer knows of their Federal or other debt.

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